Traditional lagoon management linked to extensive aquaculture and fish harvesting has certainly contributed, over time, to preserve these peculiar ecosystems, although much of the coastal lagoon areas have progressively disappeared due to land reclamation and other uses. Recently, coastal lagoons have become a relevant environmental concern: land claiming, pollution and the lack of management, among other factors, have strongly modified both the structure and functioning of these sensitive coastal ecosystems. In particular, the management of traditional aquaculture and capture fisheries activities has been identified as the main instrument to maintain lagoons' ecological features and to prevent the degradation of their sensitive habitats, both from an environmental and socioeconomic point of view.