Proteomic Profiling and Analytical Chemistry: The Crossroads
Editat de Pawel Ciborowski, Jerzy Silberringen Limba Engleză Paperback – 22 mar 2016
The book provides detailed coverage of experimental aspects such as sample preparation, protein extraction and precipitation, gel electrophoresis, microarrays, dynamics of fluorescent dyes, and more. The key feature of this book is a direct link between multistep proteomic strategy and quality control routinely applied in analytical chemistry. This second edition features a new chapter on SWATH-MS, substantial updates to all chapters, including proteomic database search and analytical quantification, expanded discussion of post-hoc statistical tests, and additional content on validation in proteomics.
- Covers the analytical consequences of protein and peptide modifications that may have a profound effect on how and what researchers actually measure
- Includes practical examples illustrating the importance of problems in quantitation and validation of biomarkers
- Helps in designing and executing proteomic experiments with sound analytics
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Specificații
ISBN-13: 9780444636881
ISBN-10: 0444636889
Pagini: 298
Dimensiuni: 152 x 229 x 15 mm
Greutate: 0.5 kg
Ediția:2 Rev ed.
Editura: ELSEVIER SCIENCE
ISBN-10: 0444636889
Pagini: 298
Dimensiuni: 152 x 229 x 15 mm
Greutate: 0.5 kg
Ediția:2 Rev ed.
Editura: ELSEVIER SCIENCE
Public țintă
analytical chemists, mass spectrometrists, researchers in proteomics, molecular biologists, biotechnologists, and pharmaceutical scientistsCuprins
Preface
1. Introduction
Jerzy Silberring and Pawel Ciborowski
2. Biomolecules
Ariel Burns, Pawel Olszowy and Pawel Ciborowski
3. General Strategies for Proteomic Sample Preparation
Piotr Suder, Peter Novak, Vladimir Havlicek and Anna Bodzon-Kulakowska
4. Protein Extraction and Precipitation
Petr Novak and Vladimir Havlicek
5. Online and Offline Sample Fractionation
Marek Smoluch, Przemyslaw Mielczarek, Anna Drabik and Jerzy Silberring
6. Immunoaffinity Depletion of High-Abundant Proteins for Proteomic Sample Preparation
Jayme Wiederin and Pawel Ciborowski
7. Gel Electrophoresis
Anna Drabik, Anna Bodzon-Kulakowska and Jerzy Silberring
8. Quantitative Measurements in Proteomics: Mass Spectrometry
Anna Drabik and Jerzy Silberring
9. SWATH-MS: Data Acquisition and Analysis
Kristin Frederick and Pawel Ciborowski
10. Top-Down Proteomics
Cory Boone and Jiri Adamec
11. Proteomic Database Search and Analytical Quantification for Mass Spectrometry
Melinda Wojtkiewicz, Jayme Wiederin and Pawel Ciborowski
12. Design and Statistical Analysis of Mass-Spectrometry-Based Quantitative Proteomics Data
Fang Yu, Fang Qiu and Jane Meza
13: Principles of Analytical Validation
Jo-Ellyn McMillan
14.Validation in Proteomics and Regulatory Affairs
Jerzy Silberring, Melinda Wojtkiewicz and Pawel Ciborowski
1. Introduction
Jerzy Silberring and Pawel Ciborowski
2. Biomolecules
Ariel Burns, Pawel Olszowy and Pawel Ciborowski
3. General Strategies for Proteomic Sample Preparation
Piotr Suder, Peter Novak, Vladimir Havlicek and Anna Bodzon-Kulakowska
4. Protein Extraction and Precipitation
Petr Novak and Vladimir Havlicek
5. Online and Offline Sample Fractionation
Marek Smoluch, Przemyslaw Mielczarek, Anna Drabik and Jerzy Silberring
6. Immunoaffinity Depletion of High-Abundant Proteins for Proteomic Sample Preparation
Jayme Wiederin and Pawel Ciborowski
7. Gel Electrophoresis
Anna Drabik, Anna Bodzon-Kulakowska and Jerzy Silberring
8. Quantitative Measurements in Proteomics: Mass Spectrometry
Anna Drabik and Jerzy Silberring
9. SWATH-MS: Data Acquisition and Analysis
Kristin Frederick and Pawel Ciborowski
10. Top-Down Proteomics
Cory Boone and Jiri Adamec
11. Proteomic Database Search and Analytical Quantification for Mass Spectrometry
Melinda Wojtkiewicz, Jayme Wiederin and Pawel Ciborowski
12. Design and Statistical Analysis of Mass-Spectrometry-Based Quantitative Proteomics Data
Fang Yu, Fang Qiu and Jane Meza
13: Principles of Analytical Validation
Jo-Ellyn McMillan
14.Validation in Proteomics and Regulatory Affairs
Jerzy Silberring, Melinda Wojtkiewicz and Pawel Ciborowski