Molecular Modeling at the Atomic Scale: Methods and Applications in Quantitative Biology: Series in Computational Biophysics
Editat de Ruhong Zhouen Limba Engleză Hardback – 21 aug 2014
The book begins with a brief introduction of major methods and applications, then covers the development of cutting-edge methods/algorithms, new polarizable force fields, and massively parallel computing techniques, followed by descriptions of how these novel techniques can be applied in various research areas in molecular biology. It also examines the self-assembly of biomacromolecules, including protein folding, RNA folding, amyloid peptide aggregation, and membrane lipid bilayer formation. Additional topics highlight biomolecular interactions, including protein interactions with DNA/RNA, membrane, ligands, and nanoparticles. Discussion of emerging topics in biomolecular modeling such as DNA sequencing with solid-state nanopores and biological water under nanoconfinement round out the coverage.
This timely summary contains the perspectives of leading experts on this transformation in molecular biology and includes state-of-the-art examples of how molecular modeling approaches are being applied to critical questions in modern quantitative biology. It pulls together the latest research and applications of molecular modeling and real-world expertise that can boost your research and development of applications in this rapidly changing field.
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Specificații
ISBN-13: 9781466562950
ISBN-10: 1466562951
Pagini: 388
Ilustrații: 48 black & white illustrations, 8 black & white tables
Dimensiuni: 156 x 234 x 25 mm
Greutate: 0.68 kg
Ediția:New.
Editura: CRC Press
Colecția CRC Press
Seria Series in Computational Biophysics
ISBN-10: 1466562951
Pagini: 388
Ilustrații: 48 black & white illustrations, 8 black & white tables
Dimensiuni: 156 x 234 x 25 mm
Greutate: 0.68 kg
Ediția:New.
Editura: CRC Press
Colecția CRC Press
Seria Series in Computational Biophysics
Cuprins
Introduction. I. Advanced Simulation Techniques. Novel sampling algorithms for molecular dynamics. Advanced free energy perturbation techniques. Massively parallel supercomputers and software for molecular dynamics. Development of modern polarizable force fields. MM-QM methods for enzymatic reactions. II. Self-Assembly of Biomolecules. Protein folding dynamics and pathways. Folding kinetics with Markov State Models. RNA folding. Misfolding and aggregation. III. Biomolecular Interactions. Protein-protein interactions. Protein-nanoparticle interactions. Ligand-receptor binding. RNA(DNA)-protein interactions. IV. Other Applications in Molecular Biology. Modeling of DNA sequencing with nanopore. Biological (confined) water dynamics. Enzymatic reaction pathways.
Descriere
This timely summary reflects the recent advances in bridging novel algorithms and high performance computing with characterization of important biological processes, such as folding dynamics of key proteins.