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Computational Strategies Towards Improved Protein Function Prophecy of Xylanases from Thermomyces lanuginosus: SpringerBriefs in Systems Biology

Autor M. V. K. Karthik, Pratyoosh Shukla
en Limba Engleză Paperback – 14 iul 2012
This Brief reports on the interplay of an amino-acid mutation towards substrate which could lead to enhanced effects on mutant. These effects need  to  be given consideration in  the  engineering  processes of protein stability and further exploration of such learning are required to provide novel indication for selection of an enzymes.  There  are  very  few  reports  showing  such  stable,  energy  efficient  model  towards  improved  protein function prediction screening in-silico structure based mutagenesis of xylanases from Thermomyces lanuginosus​
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Specificații

ISBN-13: 9781461447221
ISBN-10: 1461447224
Pagini: 51
Ilustrații: VII, 44 p. 12 illus. in color.
Dimensiuni: 155 x 235 x 17 mm
Greutate: 0.09 kg
Ediția:2012
Editura: Springer
Colecția Springer
Seria SpringerBriefs in Systems Biology

Locul publicării:New York, NY, United States

Public țintă

Research

Cuprins

Introduction.- Material and Methods.- Selection of sequences, 3D structures and multiple sequence alignment.-  Mutant generation.- Energy minimization.- Stereo-chemical quality check and analysis of non-bonded interactions.- Protein-protein docking.- InterProScan.- Identification of functionally important regions of wild type viz. Endo-1, 4-beta xylanases (1YNA).- 3d2GO server: From protein 3D structure to Gene Ontology (GO) term.-   Results and discussions.- Conclusion.

Caracteristici

One of the first reports showing stable, energy efficient model towards improved protein function prediction screening in-silico structure based mutagenesis of xylanases from Thermomyces lanuginosus Discusses computational strategies towards improved protein function prophecy and insilico structure based mutagenesis of xylanases from Thermomyces lanuginosus Describes the computational design of family 11 xylanase (endo-1,4-ß-xylanase) from Thermomyces lanuginosus Includes supplementary material: sn.pub/extras Includes supplementary material: sn.pub/extras